BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A05SP1|AL426937
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1595 635 0.0
>3x_Contig1595
Length = 10795
Score = 635 bits (310), Expect = 0.0
Identities = 468/533 (87%)
Strand = Plus / Minus
Query: 1 gtctcttatccatcgtattgaaagaggatccgnctacatcctgatgtatccaaaactgta 60
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 6351 gtctcttatccatcgtattgaaagaggatccgtctacatcctgatgtttccaaaactgta 6292
Query: 61 cttaactcttaagccgnncanagamctawawcgaatctataacctttggtgtagggtact 120
||| |||||| ||||| || ||| || |||||||||||||||||||||||||||||
Sbjct: 6291 ctttactctttagccgttcatagatctttttcgaatctataacctttggtgtagggtact 6232
Query: 121 gtggacggtccaactcagagtaacwatactcawctacttcawctggctcttccatgtrag 180
|||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||
Sbjct: 6231 gtggacggtccaactcagagtaactatactcatctacttcatctggctcttccatgttag 6172
Query: 181 twtaactctataymccggtatgcaatgaatctgtcactgtctctaaawmgtaagavcaaa 240
| ||||||| | ||||||||||||||||||||||||||||||||| || ||| | |
Sbjct: 6171 tttaactcttttttccggtatgcaatgaatctgtcactgtctctaaattgttagatctta 6112
Query: 241 acgaggtatgtgtagtaaagwaagcmccaataacwtcaataaagaagaaaamcggaagga 300
|||||||||||||||||||| |||| ||||| || || || || |||| ||||||||
Sbjct: 6111 acgaggtatgtgtagtaaagtaagctccaattacttctattttgatgaaattcggaagga 6052
Query: 301 gggataagaatgtgcatcccaatcactttvgtgacatgtcgccttgagngnannaavggn 360
|||||||| |||||| || |||||||||| |||||||||||| ||||| | | || ||
Sbjct: 6051 gggataagtatgtgcttctcaatcacttttgtgacatgtcgctttgagtgtattaatggt 5992
Query: 361 aaaagngagnanatntcaagcgcacagtttccaggcgtngacgcgcgacagcaaaaaaca 420
||| | ||| || ||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 5991 aaatgtgagtttatttcaagcgcacagtttccaggcgttgacgcgcgacagcaaataaca 5932
Query: 421 acaccngcacaaaaagaacaaaacgtccatacgaaactacagtcagcaggctcttccaag 480
||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 5931 acacctgcacaaaaagaacaaaacgtccattcgatactacagtcagcaggctcttccaag 5872
Query: 481 tcgcncggagnaagaaacagggcaacttgaatagcgtgacacgtatggvtcca 533
| || ||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5871 ttgctcggagttagaaacagggcaacttgaatagcgtgacacgtatggttcca 5819
Score = 299 bits (146), Expect = 5e-81
Identities = 156/163 (95%)
Strand = Plus / Minus
Query: 653 cttggtaactggwwgctgaaacgttaccacctttaccggtccagttaatktggatgtntt 712
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 5699 cttggtaactggaagctgaaacgttaccacctttaccggtccagttaatgtggatgtttt 5640
Query: 713 ggtcagctggcaagtbttcggaagcagcttctggcaagactctgavagtgtgagcaccga 772
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5639 ggtcagctggcaagttttcggaagcagcttctggcaagactctgaaagtgtgagcaccga 5580
Query: 773 agtaatcacgttgagcttgtagcaagtcagctggcaatctttc 815
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5579 agtaatcacgttgagcttgtagcaagttagctggcaatctttc 5537
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.716 1.34
Gapped
Lambda K H
1.42 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2821
Number of Sequences: 1807
Number of extensions: 2821
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 49 (100.9 bits)